Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912931.1_cds_XP_016463007.1_56171
CDS Infomation

[gene=LOC107786086] [db_xref=GeneID:107786086] [protein=taxadiene 5-alpha hydroxylase-like] [protein_id=XP_016463007.1] [location=complement(join(2358..2651,2774..2961,3060..4035))] [gbkey=CDS]
Sequence

ATGGCTCTTTCTTTGTTAAGCCTAATCAACTTTCCTTTTTCTTTCTCCTTATTAATCTTT
TTCATAATTGTGTTTTCCATTCTAATGAGACATTACAAAGGCTACAAACACATTACCAAA
AAGAAACTTCCACCAGGAGAAATGGGGCTCCCATGGATTGGTGAAACCATAGAATTTTAC
AAAGCCCAAAAAAAGAACAAATTATTTGAAGAATTTGTTCAGCCCCGGATCGAAAAATAT
GGAAAGACATTCAAAACAAGACTAATGGGATCACCAACAGTAGTTGTATGTGGAGCAGAA
GCTAATATGTTCTTTTTGTCTAATGAATTCAAATTGGTAATAAGTTCATGGCCTACTTCT
TCAGTTGAGCTAATGGGCAAGAATTGTATTATGGAGAAACAAGGAGACGCGCATCGATGC
CTTCGTGGGATTATATCTTCAAGTCTTGCCTCTTTTAGCCTAGATGCTATGGTTCCTAAA
ATTTGTAACACAATTCAATCTCACTTAGACAAGAATTGCAATGGCCAAGACCAGATCATA
AAACTGTATCATCTGACCAAATCTTTGACGTTCAAGATTGTGTTTGAGTGCTTTTTGGGG
ATAGTAGTCAAACCAGGATTACTTGAAACGTTTGAGAGAGTATTGGAAGGTGCTTTTTCA
CCCCCATTTAAGTTTCCAGGATCTAAGTTTTCAAGGGCAAAAAATGCAAGATTGAAAATA
GAGAAAATTCTTGTTGAGGTTATAAGGGAGAAGAGAAGAGAGATAGAATTAGGAGAGGAG
AAAGAAGGGAAGTTAGACGAGGCATTACTTTCTCGGTTAGTGAAAGCGTTGATTCGTGGT
GAGGTAAGTGAAGAAGAGGTTGTTGATAATGTTGTTTTGCTAGTGTTTGCTGCTCATGAT
ACAACTTCTTTTGCCATTGCTATGACATTTAGGATGTTGGCTCATCATCCCACATGCTAT
TCTCTTCTCATTCAAGAACATGCTAATATAATGAGTAACAAAGGACCAGATGAGATACTA
TCGTTGGAAGATACAAAAAGGATGAAATACACCTGGCAAGTTGCTCGAGAAAGCATGAGG
CTGTTTCCTCCTATCTTTGGTTCTTTTAGAAAAGCAATTACTGACATTGAATTTGAAGGA
TTCACTATTCCAAAAGGTTGGAAGGTATTGTGGACAACATATGGTACACATTATAGTCAA
GAGTATTTTGAAGAGCCCCAAAATTTTGACCCAAGTAGATTTGAGGAGCCTGTTCAACCA
TATGCATTTGTACCATTTGGAGGAGGGCCAAGGTTGTGCGCAGGATACCAATTGGCAAAG
CTAAATATTCTTATATTTGTTCATTGCGTTGTGACACGATATGATTGGTCCTTAATAAAT
CCTGACGAACCAATTGTCATGGATCCCCTTCCCTTCCCTTCCAAAGGAATGCCCATTAAA
ATTTCTCCCAAGTTCTAA

Peptide Sequence

PEP ID

XP_016463007.1
PEP Infomation

PREDICTED: taxadiene 5-alpha hydroxylase-like [Nicotiana tabacum]
Sequence

MALSLLSLINFPFSFSLLIFFIIVFSILMRHYKGYKHITKKKLPPGEMGLPWIGETIEFY
KAQKKNKLFEEFVQPRIEKYGKTFKTRLMGSPTVVVCGAEANMFFLSNEFKLVISSWPTS
SVELMGKNCIMEKQGDAHRCLRGIISSSLASFSLDAMVPKICNTIQSHLDKNCNGQDQII
KLYHLTKSLTFKIVFECFLGIVVKPGLLETFERVLEGAFSPPFKFPGSKFSRAKNARLKI
EKILVEVIREKRREIELGEEKEGKLDEALLSRLVKALIRGEVSEEEVVDNVVLLVFAAHD
TTSFAIAMTFRMLAHHPTCYSLLIQEHANIMSNKGPDEILSLEDTKRMKYTWQVARESMR
LFPPIFGSFRKAITDIEFEGFTIPKGWKVLWTTYGTHYSQEYFEEPQNFDPSRFEEPVQP
YAFVPFGGGPRLCAGYQLAKLNILIFVHCVVTRYDWSLINPDEPIVMDPLPFPSKGMPIK
ISPKF

Transcript Sequence

Gene sequence data has not been registered.